The legume family includes many crop species that provide protein in human and animal diets, and that are sources of vegetable oils and nutritionally important natural products, such as flavonoids. Legumes, by virtue of their symbiosis with soil bacteria in the Rhizobiaceae, also supply nitrogen in a biologically available form to both natural and agricultural ecosystems. The emphasis of my research group is to understand how the plant host's cells respond to bacterial signals to initiate development of a nitrogen-fixing root nodule. Specifically, we are investigating how the plant alters the regulation of its cell cycle, induces expression of specific genes, and changes cellular architecture to support infection by rhizobia and formation of a nodule meristem.
To answer these questions we have chosen Medicago truncatula, a close relative of alfalfa, for study. Because of this plant's relatively small and simple genome, it is suitable for genetic and genomic analysis, and has been selected as a model species by a growing number of researchers. Together with many collaborators, we are investigating how the Medicago genome functions in a wide variety of developmental conditions. We are creating DNA microarrays to learn how microbial interactions affect global patterns of host gene expression, and to produce a valuable resource for other aspects of legume biology.
Silverstein
KA, Graham MA, VandenBosch KA. Novel paralogous gene
families with potential function in legume nodules and seeds. Curr Opin
Plant Biol. 2006 Apr;9(2):142-6. Epub 2006 Feb 3. Review.
Lohar
DP, Sharopova N, Endre G, Penuela S, Samac D, Town C, Silverstein KA, VandenBosch
KA. Transcript analysis of early nodulation events in Medicago
truncatula. Plant Physiol. 2006 Jan;140(1):221-34. Epub 2005 Dec 23.
Ivashuta
S, Liu J, Liu J, Lohar DP, Haridas S, Bucciarelli B, VandenBosch
KA , Vance CP, Harrison MJ, Gantt JS. RNA interference
identifies a calcium-dependent protein kinase involved in Medicago truncatula
root development. Plant Cell. 2005 Nov;17(11):2911-21. Epub 2005 Sep 30.
Silverstein
KA, Graham MA, Paape TD, VandenBosch KA . Genome
organization of more than 300 defensin-like genes in Arabidopsis. Plant Physiol. 2005 Jun;138(2):600-10.
Sherrier, D.J., Taylor, G.S., Silverstein, K.A., Gonzales, M.B., VandenBosch
KA . A
ccumulation of extracellular proteins bearing unique proline-rich motifs
in intercellular spaces of the legume nodule parenchyma. Protoplasma.
2005 Apr;225(1-2):43-55. Epub 2005 May 4.
Lohar
DP, VandenBosch KA. Grafting between model legumes
demonstrates roles for roots and shoots in determining nodule type and
host/rhizobia specificity. J Exp Bot. 2005 Jun;56(416):1643-50. Epub 2005
Apr 11.
Kuppusamy
KT, Endre G, Prabhu R, Penmetsa RV, Veereshlingam H, Cook DR, Dickstein
R, Vandenbosch KA. LIN, a Medicago truncatula gene
required for nodule differentiation and persistence of rhizobial infections. Plant Physiol. 2004 Nov;136(3):3682-91. Epub 2004 Oct 29.
Graham
MA, Silverstein KA, Cannon SB, VandenBosch KA. Computational
identification and characterization of novel genes from legumes. Plant Physiol. 2004 Jul;135(3):1179-97.
Liu
J, Blaylock LA, Endre G, Cho J, Town CD, VandenBosch KA ,
Harrison MJ. Transcript profiling coupled with spatial expression analyses
reveals genes involved in distinct developmental stages of an arbuscular
mycorrhizal symbiosis. Plant Cell. 2003 Sep;15(9):2106-23.
Lamblin, A.F., Crow, J.A., Johnson, J.E., Silverstein, K.A., Kunau, T.M.,
Kilian, A., Benz, D., Stromvik, M., Endre, G., VandenBosch,
K.A., Cook, D.
R., Young, N.D., Retzel, E.F.
MtDB: a database for personalized data mining of the model legume Medicago
truncatula transcriptome. Nucleic Acids Res. 2003 Jan 1;31(1):196-201.
Fedorova
M, van de Mortel J, Matsumoto PA, Cho J, Town CD, VandenBosch
KA, Gantt
JS, Vance CP. Genome-wide identification of nodule-specific
transcripts in the model legume Medicago truncatula. Plant Physiol. 2002 Oct;130(2):519-37.
VandenBosch, K.A., and J. Frugoli. 2001. Guidelines
for genetic nomenclature and community governance for the model legume Medicago
truncatula. Mol.
Plant-Microbe Int. 14(12):1364-1367.