Adaptive Landscapes

 
 

Adaptive landscapes have three components:
G, Genotypes.
P, Phenotypes
F, Fitnesses
The relationships between these components specify the landscape.
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Lunzer, Miller, Felsheim & Dean. 2005. Science 310:499-501.

All IMDHs use NAD as a coenzyme.  We replaced the wildtype gene of E. coli with an engineered gene that encodes a kinetically equivalent NADP-specific "RKYVYR" enzyme to break a 4 billion year old constraint. 
The GP map.
Engineered genotypic intermediates reveal each mutation contributes additively to enzyme performance (kcat/Km) with NAD and with NADP.  A savage trade-off in performance ensures all genotypes hug the axes.
The GF map.
Engineered genes were recombined into the leu operon and fitnesses determined in competition with wildtype.  The same mutations often produce marked epistatic contributions to fitness.
The PF map.
A metabolic model describing fitness as a function of enzyme performance explains 97% of the data.  Epistasis is produced by the non-linear dependence of fitness on performance.  NADP-specific mutants are inferior because intense product inhibition by intracellular NADPH lowers in vivo performance.

The landscape is smooth like Fisher's - not rugged like WrightÕs.
The landscape has a single adaptive "peak" where the wildtype is..
The.landscape would have two "peaks" (wildtype and "RKYVYR") were Fisher's assumption, of many mutations each of small effect, correct (since the trade-off would now force all evolutionary paths into the maladaptive valley at the origin).